Survival-associated meQTLs across different cancer types
We identified 23,432 meQTLs associated with patient overall survival across different cancer types at FDR < 0.05.
|
Cancer type
|
SNP ID
|
SNP position (hg19)
|
Alleles (A/a)
|
log-rank test p-value
|
Sample size
|
Median survival time AA
|
Median survival time Aa
|
Median survival time aa
|
|
|---|---|---|---|---|---|---|---|---|---|
| KIRP | rs61843174 | chr10:43522689 | G/A | 2.09E-5 | 287 | 25.67 | 25.95 | 11.43 | KM Plot |
| KIRP | rs61843175 | chr10:43522808 | T/G | 4.3E-5 | 289 | 25.67 | 25.95 | 11.43 | KM Plot |
| KIRP | rs61843176 | chr10:43523471 | C/T | 5.67E-5 | 289 | 25.63 | 26.4 | 11.43 | KM Plot |
| KIRP | rs61843177 | chr10:43523526 | G/A | 4.3E-5 | 289 | 25.67 | 25.95 | 11.43 | KM Plot |
| KIRP | rs61843178 | chr10:43523970 | A/G | 3.88E-5 | 289 | 25.67 | 25.95 | 11.43 | KM Plot |
| KIRP | rs61843179 | chr10:43524693 | G/A | 5.67E-5 | 289 | 25.63 | 26.4 | 11.43 | KM Plot |
| KIRP | rs61843180 | chr10:43524714 | A/G | 3.88E-5 | 289 | 25.67 | 25.95 | 11.43 | KM Plot |
| KIRP | rs61843181 | chr10:43525493 | C/T | 5.93E-5 | 288 | 25.62 | 26.4 | 11.43 | KM Plot |
| KIRP | rs61843182 | chr10:43526056 | G/T | 5.86E-5 | 289 | 25.62 | 26.52 | 11.43 | KM Plot |
| KIRP | rs61843183 | chr10:43526508 | A/G | 4.13E-5 | 289 | 25.63 | 26.4 | 11.43 | KM Plot |
| KIRP | rs61843184 | chr10:43527047 | A/C | 7.22E-5 | 283 | 25.6 | 26.63 | 11.43 | KM Plot |
| KIRP | rs61843185 | chr10:43527169 | C/T | 5.86E-5 | 289 | 25.62 | 26.52 | 11.43 | KM Plot |
| KIRP | rs61843186 | chr10:43527256 | G/A | 4.56E-5 | 289 | 25.63 | 26.4 | 11.43 | KM Plot |
| KIRP | rs61843187 | chr10:43529051 | A/G | 5.86E-5 | 289 | 25.62 | 26.52 | 11.43 | KM Plot |
| KIRP | rs61843188 | chr10:43530194 | A/T | 4.13E-5 | 289 | 25.63 | 26.4 | 11.43 | KM Plot |